Detection of Whole-Genome Resequencing-Based QTLs Associated with Pre-Harvest Sprouting in Rice (Oryza sativa L.)

• 발행기관: 한국육종학회
• 저자명: Seong-Gyu Jang San Mar Lar Hongjia Zhang Ah-Rim Lee Ja-Hong Lee Na-Eun Kim So-Yeon Park Joohyun Lee Tae-Ho Ham Soon-Wook Kwon
• 간행물 정보: 『Plant breeding and biotechnology』Vol.8 No.4, 396~404쪽, 전체 9쪽
• 주제분류: 농수해양 > 기타농수해양
• 파일형태: PDF
• 발행일자: 2020.12.01

영문 초록

Pre-harvest sprouting (PHS) is one of the important traits that not only cause serious economic issues but also lead to reduction in grain quality and yield in rice (Oryza sativa L.). To analyze the quantitative trait loci (QTLs) for PHS tolerance, we evaluated PHS, seed dormancy (SD), and low-temperature germination (LTG) of 88 F2:3 populations and their parental lines. Genotypic analysis was performed by using 441 single nucleotide polymorphisms (SNPs) detected from re-sequencing data. Seed dormancy (SD) and low-temperature germination (LTG) were identified to exhibit a positive correlation with PHS. Under the field condition, two major QTLs for PHS, qPHS1-1{^FC} and qPHS1-2{^FC} were identified on chromosome 1. Under the growth chamber condition, qPHS1-1{^GC} and qPHS1-2{^GC} had the same regions on chromosome 1. QTLs of SD and LTG (qSD1-1, qSD1-2, qLTG1-1, and qLTG1-2) had the same regions; these results suggested that candidate QTLs demonstrate pleiotropy about PHS, SD, and LTG. The major QTLs detected in this study are hypothesized to provide an important resource for molecular breeding and gain a better understanding of the genetics of traits in rice.

목차

INTRODUCTION

MATERIALS AND METHODS

RESULTS

DISCUSSION

ACKNOWLEDGEMENTS

REFERENCES

키워드

Pre-harvest sprouting Whole genome resequencing Recombinant inbred lines Rice QTL